BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A01LP1|AL428138
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig891 1920 0.0
>3x_Contig891
Length = 5018
Score = 1920 bits (968), Expect = 0.0
Identities = 979/982 (99%), Gaps = 1/982 (0%)
Strand = Plus / Minus
Query: 1 ccactaatttcgatgaactacagaagtctctagaccaatccgtgaaagactcatgcgagg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2405 ccactaatttcgatgaactacagaagtatctagaccaatccgtgaaagactcatgcgagg 2346
Query: 61 gcctcatggtcaagatgttagaaggagaggagtcccattacgaacccagtaagagatcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2345 gcctcatggtcaagatgttagaaggagaggagtcccattacgaacccagtaagagatcga 2286
Query: 121 gaaactggttaaaattgaagaaggattacttggaaggtgtcggggactccctagacctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2285 gaaactggttaaaattgaagaaggattacttggaaggtgtcggggactccctagacctag 2226
Query: 181 tggtccttggagcctactatggacgcgggaaaagaacaggcacctacggtggattcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2225 tggtccttggagcctactatggacgcgggaaaagaacaggcacctacggtggattcctct 2166
Query: 241 tgggctgctacaacttggattcagaggaattcgaaacatgttgcaagataggaacaggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2165 tgggctgctacaacttggattcagaggaattcgaaacatgttgcaagataggaacaggct 2106
Query: 301 tcagcgatgagatgttacaagatttgtataccaaattgaaggacaccacagtagaacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2105 tcagcgatgagatgttacaagatttgtataccaaattgaaggacaccacagtagaacacc 2046
Query: 361 cgagcacaaacgtgatatacgattcatctgccccagcagatgtatggtttgaacccagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2045 cgagcacaaacgtgatatacgattcatctgccccagcagatgtatggtttgaacccagca 1986
Query: 421 tgttgttcgaggtcctgactgcggatctctcgctttcaccggtgtacaaagccggttttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 tgttgttcgaggtcctgactgcggatctctcgctttcaccggtgtacaaagccggttttg 1926
Query: 481 aagccttcggtaagggaatatcgctacgctttcccaggttcgtaagaataagagacgata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1925 aagccttcggtaagggaatatcgctacgctttcccaggttcgtaagaataagagacgata 1866
Query: 541 aaaatgtcactgacgcaacctcatccgatcaagtgatagagttttacgagtcacaggccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1865 aaaatgtcactgacgcaacctcatccgatcaagtgatagagttttacgagtcacaggccc 1806
Query: 601 atatgaaatagggatacccgacgtaaacatacatacaatatacacacacctagtttactc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1805 atatgaaatagggatacccgacgtaaacatacatacaatatacacacacctagtttactc 1746
Query: 661 caattttcatgtagtccaacagactacatggactgaatctaactactgactgtcaagtac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1745 caattttcatgtagtccaacagactacatggactgaatctaactactgactgtcaagtac 1686
Query: 721 aagatgatcatcgtcctgggtgttcctgaccggaaaccaggggtgc-actgggtgcgtat 779
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1685 aagatgatcatcgtcctgggtgttcctgaccggaaaccaggggtgcaactgggtgcgtat 1626
Query: 780 ggaacctagtggcagcctaaggcacaggagacctggatatgtggatgtatgatcaaagat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1625 ggaacctagtggcagcctaaggcacaggagacctggatatgtggatgtatgatcaaagat 1566
Query: 840 gagtcttggtctggccttcttccagaaacggctgtgctggaaacccatttttcgcaccgt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 gagtcttggtctggccttcttccagaaacggctgtgctggaaacccatttttcgcaccgt 1506
Query: 900 gtttgccacacccgaaaatgctcggtgcggtgcggacagtgtgcacgtgamccaccgggc 959
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1505 gtttgccacacccgaaaatgctcggtgcggtgcggacagtgtgcacgtgacccaccgggc 1446
Query: 960 tttatcggtgccaagggtctgc 981
||||||||||||||||||||||
Sbjct: 1445 tttatcggtgccaagggtctgc 1424
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5066
Number of Sequences: 1807
Number of extensions: 5066
Number of successful extensions: 22
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)